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scitran/afq-pipeline-sdk:1.0.1

Manifest digest

sha256:88a0e54ae80f7ed46db2fe69ef97c4e1461e398e385b06a307c625c1da41902a

OS/ARCH

linux/amd64

Compressed size

1.34 GB

Last pushed

over 8 years by scitran

Type

Image

Manifest digest

sha256:88a0e54ae80f7ed46db2fe69ef97c4e1461e398e385b06a307c625c1da41902a

Image Layers

Image Layers

1ADD file ... in /33.25 MB
2CMD ["/bin/bash"]0 B
3/bin/sh -c apt-get -qq update480.09 MB
4ENV LD_LIBRARY_PATH=/opt/mcr/v82/runtime/glnxa64:/opt/mcr/v82/bin/glnxa64:/opt/mcr/v82/sys/os/glnxa64:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd64/server:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd640 B
5ENV XAPPLRESDIR=/opt/mcr/v82/X11/app-defaults0 B
6MAINTAINER Michael Perry <[email protected]>0 B
7ENV FLYWHEEL=/flywheel/v00 B
8WORKDIR /flywheel/v0115 B
9COPY file:a92b28e6df3ad1d99380295c44e6760036211bff70ecdd01228170dce28a61dc in /flywheel/v0/run 567 B
10/bin/sh -c set -x 516 B
11/bin/sh -c set -x 3.07 KB
12/bin/sh -c { 220 B
13/bin/sh -c sed -i -e305 B
14ARG DEBIAN_FRONTEND=noninteractive0 B
15|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c apt-get391.15 MB
16ENV PATH=/usr/lib/ants:/usr/lib/mrtrix/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
17COPY file:7c64c858f3ce43dce9add29ec68027b994340d151aa7f7e7107ba108e6f5c69a in /usr/local/bin/AFQ 33.94 MB
18COPY file:637777b3c009c6a52749c2f508062f01d427ecdd9f20492d6d60fddf5c3c0e36 in /flywheel/v0/run_afq 1.84 KB
19COPY file:4e6ab9bd670084e8d6d5e6761f67c2b8fcb32ec031c3ccece3d91bbfc603eaa7 in /flywheel/v0/afq_parse_config.py 1.33 KB
20|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c chmod33.94 MB
21COPY file:085308bd7a41feb286c04b04142e485c84731ea5c211bea711bb1aac1ba74fba in /opt/qmr_control_data.mat 87.78 MB
22ENV TEMPLATES=/templates0 B
23|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c mkdir98 B
24|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c svn59.94 MB
25|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c svn26.15 MB
26ENV DISPLAY=:1.00 B
27ADD bdf22249b32cbcd49a2670d7990addd2b9b24ec97fa1bccd48103dfc6cde1c2b in /usr/local/bin/dtiInit 28.35 MB
28ADD 294f5f4f1c93fb3ea8d6a3c87ed4625b69132124db67ae8cb500748e0d028df2 in /usr/local/bin/ 854.33 KB
29ADD 75f65eb38aabb333fb5eeb2c2cea6feffc1ef3b8afba4ca82999c6f7470738fa in /templates/ 314.16 KB
30ADD efdc59303c8cb978bef041567fff9a0c89c6ac11bda00bc42dd0f8b969b8adda in /templates/ 466 B
31COPY file:6f2c0e4f6931f18694d1c08cc133752fc2cc352cf185fe8e579e6b6d6c67f950 in /opt/help.txt 1.06 KB
32|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c chmod29.19 MB
33ENV FSLOUTPUTTYPE=NIFTI_GZ0 B
34WORKDIR /flywheel/v00 B
35COPY file:11e2790ce1d2d189198181374ba3cdb5e9051c193edd452dfe094c73b1588201 in /flywheel/v0/run_dtiinit 1.03 KB
36COPY file:79aa07e50e76ab8ed5f2be0bbda1c1d536e0265a9d914b04fd6779bec7a20652 in /flywheel/v0/dtiinit_parse_config.py 1.74 KB
37COPY file:43e8d7ac44d2b97eb8ba1142d1a870b4db11309e9965f5a8cfd7b1bb5c101801 in /flywheel/v0/run_fslmerge 1.59 KB
38|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c chmod5.67 KB
39ENTRYPOINT ["/flywheel/v0/run"]0 B
40COPY file:ddb4c88cf06443d3897c4068f88c50c06e40324ccde13e03f3411873993c3c27 in /flywheel/v0/manifest.json 5.07 KB
41MAINTAINER Michael Perry <[email protected]>0 B
42ENV FLYWHEEL=/flywheel/v00 B
43WORKDIR /flywheel/v00 B
44COPY file:dff7a96c1ca1cf67f279b7991891ac5d1ef0eb5ff1965870a8338d26898ae74a in /flywheel/v0/run 668 B
45/bin/sh -c apt-get update &&35.4 MB
46/bin/sh -c pip install --upgrade2.06 MB
47WORKDIR /opt/flywheel113 B
48ENV COMMIT=bf2e0d60 B
49ENV LD_LIBRARY_PATH_TMP=/opt/mcr/v82/runtime/glnxa64:/opt/mcr/v82/bin/glnxa64:/opt/mcr/v82/sys/os/glnxa64:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd64/server:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd640 B
50ENV LD_LIBRARY_PATH= 0 B
51/bin/sh -c git clone https://github.com/flywheel-io/sdk417.45 KB
52/bin/sh -c ln -s workspace/src/flywheel.io/sdk162 B
53/bin/sh -c cd sdk &&36.25 KB
54/bin/sh -c sdk/make.sh116.83 MB
55/bin/sh -c sdk/bridge/make.sh12.88 MB
56ENV PYTHONPATH=/opt/flywheel/workspace/src/flywheel.io/sdk/bridge/dist/python/flywheel0 B
57ENV LD_LIBRARY_PATH=/opt/mcr/v82/runtime/glnxa64:/opt/mcr/v82/bin/glnxa64:/opt/mcr/v82/sys/os/glnxa64:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd64/native_threads:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd64/server:/opt/mcr/v82/sys/java/jre/glnxa64/jre/lib/amd640 B
58COPY file:f5da9733c1d8428bb22025b43117b5ed5faf793cc55a0f00d1715b528201ab85 in /flywheel/v0/ 1014 B
59COPY file:60c5e436d208a1c2b08442beaf3f4c1d815b10b504f8aad6822fe8f59b405db4 in /flywheel/v0/ 1.37 KB
60/bin/sh -c env -u HOSTNAME479 B
61/bin/sh -c chmod +x ${FLYWHEEL}/*12.63 KB
62ENTRYPOINT ["/flywheel/v0/run"]0 B
63COPY file:ad126d384b98eedba9786e27d164e3ecb26787865da52011977a342e6a4c2af8 in /flywheel/v0/manifest.json 5.17 KB

Command

ADD file:1d6c943b8cfe3ff8248653657d4bdd832f647e03df1925d1df6444c1b6e7a4e0 in /