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poldracklab/smriprep:unstable

Manifest digest

sha256:1be176667d262ba0db05f089175449d5cef0722203baafecf288936f40705a67

OS/ARCH

linux/amd64

Compressed size

4.46 GB

Last pushed

over 6 years by bidsappsdev

Type

Image

Manifest digest

sha256:1be176667d262ba0db05f089175449d5cef0722203baafecf288936f40705a67

Image Layers

Image Layers

1ADD file ... in / 49.12 MB
2/bin/sh -c set -xe &&814 B
3/bin/sh -c rm -rf /var/lib/apt/lists/*513 B
4/bin/sh -c sed -i 's/^#\s*\(deb.*universe\)$/\1/g'675 B
5/bin/sh -c mkdir -p /run/systemd164 B
6CMD ["/bin/bash"]0 B
7COPY file:4ea5bd1e0c912137c2d7906b7b7bbea0b06e584acc726aa396c4719c22ee84f1 in /usr/local/etc/neurodebian.gpg 3.33 KB
8/bin/sh -c apt-get update &&156.41 MB
9/bin/sh -c curl -o pandoc-2.2.2.1-1-amd64.deb25.08 MB
10/bin/sh -c curl -sSL https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/6.0.1/freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1.tar.gz2.76 GB
11ENV FSL_DIR=/usr/share/fsl/5.0 OS=Linux FS_OVERRIDE=00 B
12ENV SUBJECTS_DIR=/opt/freesurfer/subjects FUNCTIONALS_DIR=/opt/freesurfer/sessions MNI_DIR=/opt/freesurfer/mni0 B
13ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PATH=/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
14/bin/sh -c curl -sSL "http://neuro.debian.net/lists/$(16.71 KB
15/bin/sh -c apt-get update &&174.22 MB
16ENV FSLDIR=/usr/share/fsl/5.0 FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE0 B
17ENV PATH=/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
18ENV ANTSPATH=/usr/lib/ants0 B
19/bin/sh -c mkdir -p $ANTSPATH504.27 MB
20ENV PATH=/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21/bin/sh -c npm install -g2.69 MB
22/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda3-4.5.11-Linux-x86_64.sh147.45 MB
23ENV PATH=/usr/local/miniconda/bin:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin CPATH=/usr/local/miniconda/include/: LANG=C.UTF-80 B
24/bin/sh -c conda install -y590.53 MB
25/bin/sh -c python -c "from17.59 KB
26ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
27/bin/sh -c useradd -m -s4.47 KB
28WORKDIR /home/smriprep0 B
29ENV HOME=/home/smriprep0 B
30WORKDIR /src/92 B
31COPY dir:fe23374693d0488fa09321269373bdee460035cce1c046bf8fb7ca3f8dd044ec in /src/smriprep 3.22 MB
32ARG VERSION0 B
33|1 VERSION=0.6.2+3.g50e24e89c /bin/sh -c echo84.76 MB
34|1 VERSION=0.6.2+3.g50e24e89c /bin/sh -c find2.27 KB
35ENV IS_DOCKER_8395080871=10 B
36|1 VERSION=0.6.2+3.g50e24e89c /bin/sh -c ldconfig12.96 KB
37WORKDIR /tmp/0 B
38ENTRYPOINT ["/usr/local/miniconda/bin/smriprep"]0 B
39ARG BUILD_DATE0 B
40ARG VCS_REF0 B
41LABEL org.label-schema.build-date=2020-06-10T05:17:39Z org.label-schema.name=sMRIPrep org.label-schema.description=sMRIPrep0 B

Command

ADD file:7529d28035b43a2281b9ba1d3cf6bde4f0d9517693e9412328761d51c24091b4 in /