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pennlinc/xcp_d:0.11.0

Machine learning & AI
Data science
Manifest digest

sha256:2fc4614356dee487edcd9fc1829e4c444bfad0997fa42df02d092d5296518edf

OS/ARCH

linux/amd64

Compressed size

5.2 GB

Last pushed

about 1 year by tsalo

Type

Image

Manifest digest

sha256:2fc4614356dee487edcd9fc1829e4c444bfad0997fa42df02d092d5296518edf

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.17 MB
6CMD ["/bin/bash"]0 B
7COPY docker/files/neurodebian.gpg /usr/local/etc/neurodebian.gpg # buildkit3.33 KB
8RUN /bin/sh -c mkdir /AtlasPack99 B
9COPY /AtlasPack/tpl-fsLR_*.dlabel.nii /AtlasPack/ # buildkit2.22 MB
10COPY /AtlasPack/tpl-MNI152NLin6Asym_*.nii.gz /AtlasPack/ # buildkit6.15 MB
11COPY /AtlasPack/atlas-4S*.tsv /AtlasPack/ # buildkit89.14 KB
12COPY /AtlasPack/*.json /AtlasPack/ # buildkit5.42 KB
13RUN /bin/sh -c apt-get update287.22 MB
14ENV OS=Linux FIX_VERTEX_AREA=0 B
15RUN /bin/sh -c curl -sSLO245.53 MB
16ENV PATH=/usr/local/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin CPATH=/usr/local/miniconda/include: LANG=C.UTF-8 LC_ALL=C.UTF-80 B
17RUN /bin/sh -c conda install338.96 MB
18RUN /bin/sh -c curl -sSL3.21 KB
19RUN /bin/sh -c apt-get update100.2 MB
20RUN /bin/sh -c apt-get update1.13 GB
21ENV PATH=/usr/local/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/afni-latest AFNI_INSTALLDIR=/opt/afni-latest AFNI_IMSAVE_WARNINGS=NO0 B
22RUN /bin/sh -c echo "Downloading45.88 MB
23ENV C3DPATH=/opt/c3d/bin PATH=/opt/c3d/bin:/usr/local/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/afni-latest0 B
24COPY /usr/lib/fsl/5.0/slicer /opt/fsl/lib/slicer # buildkit13.58 KB
25COPY /usr/lib/fsl/5.0/slicesdir /opt/fsl/lib/slicesdir # buildkit2.46 KB
26COPY /usr/lib/fsl/5.0/pngappend /opt/fsl/lib/pngappend # buildkit6.13 KB
27COPY /usr/lib/fsl/5.0/remove_ext /opt/fsl/lib/remove_ext # buildkit1.84 KB
28COPY /usr/bin/fsl5.0-slicer /opt/fsl/bin/fsl-5.0-slicer # buildkit854 B
29COPY /usr/bin/fsl5.0-slicesdir /opt/fsl/bin/fsl5.0-slicesdir # buildkit854 B
30COPY /usr/bin/fsl5.0-pngappend /opt/fsl/bin/fsl5.0-pngappend # buildkit857 B
31COPY /usr/bin/fsl5.0-remove_ext /opt/fsl/bin/fsl5.0-remove_ext # buildkit857 B
32COPY /usr/share/fsl/5.0/bin/slicer /opt/fsl/bin/slicer # buildkit13.58 KB
33COPY /usr/share/fsl/5.0/bin/slicesdir /opt/fsl/bin/slicesdir # buildkit2.46 KB
34COPY /usr/share/fsl/5.0/bin/pngappend /opt/fsl/bin/pngappend # buildkit6.13 KB
35COPY /usr/share/fsl/5.0/bin/remove_ext /opt/fsl/bin/remove_ext # buildkit1.84 KB
36COPY /usr/lib/fsl/5.0/libnewimage.so /opt/fsl/lib/libnewimage.so # buildkit436.57 KB
37COPY /usr/lib/fsl/5.0/libmiscmaths.so /opt/fsl/lib/libmiscmaths.so # buildkit215.34 KB
38COPY /usr/lib/fsl/5.0/libmiscpic.so /opt/fsl/lib/libmiscpic.so # buildkit35.57 KB
39COPY /usr/lib/fsl/5.0/libfslio.so /opt/fsl/lib/libfslio.so # buildkit21.03 KB
40COPY /usr/lib/fsl/5.0/libutils.so /opt/fsl/lib/libutils.so # buildkit20.27 KB
41COPY /usr/lib/fsl/5.0/libprob.so /opt/fsl/lib/libprob.so # buildkit15.27 KB
42COPY /usr/lib/libnewmat.so.10.0.0 /opt/fsl/lib/libnewmat.so.10 # buildkit120.11 KB
43COPY /usr/lib/libniftiio.so.2 /opt/fsl/lib/libniftiio.so.2 # buildkit58.3 KB
44COPY /usr/lib/libznz.so.2 /opt/fsl/lib/libznz.so.2 # buildkit4.28 KB
45COPY /usr/lib/fsl/5.0/applywarp /opt/fsl/lib/applywarp # buildkit199.26 KB
46ENV FSLDIR=/opt/fsl FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE FSLLOCKDIR=0 B
47ENV ANTSPATH=/usr/lib/ants0 B
48RUN /bin/sh -c mkdir -p736.02 MB
49ENV PATH=/usr/lib/ants/ants-2.5.3/bin:/opt/fsl/lib:/opt/fsl/bin:/opt/c3d/bin:/usr/local/miniconda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/afni-latest0 B
50RUN /bin/sh -c npm install3.39 MB
51RUN /bin/sh -c npm install46.03 MB
52ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
53RUN /bin/sh -c useradd -m4.26 KB
54WORKDIR /home/xcp_d32 B
55ENV HOME=/home/xcp_d0 B
56RUN /bin/sh -c python -c14.14 KB
57COPY scripts/fetch_templates.py fetch_templates.py # buildkit1.88 KB
58RUN /bin/sh -c python fetch_templates.py473.78 MB
59COPY scripts/fix_atlaspack.py fix_atlaspack.py # buildkit842 B
60RUN /bin/sh -c python fix_atlaspack.py8.54 MB
61RUN /bin/sh -c strip --remove-section=.note.ABI-tag2.23 MB
62RUN /bin/sh -c curl -o25.08 MB
63RUN /bin/sh -c find $HOME473.78 MB
64RUN /bin/sh -c ldconfig #7.77 KB
65WORKDIR /tmp/32 B
66COPY . /src/xcp_d # buildkit668.49 MB
67ARG VERSION=0.0.10 B
68RUN |1 VERSION=0.11.0 /bin/sh -c200.93 MB
69RUN |1 VERSION=0.11.0 /bin/sh -c475.5 MB
70RUN |1 VERSION=0.11.0 /bin/sh -c7.63 KB
71WORKDIR /tmp/32 B
72ENTRYPOINT ["/usr/local/miniconda/bin/xcp_d"]0 B
73ARG BUILD_DATE0 B
74ARG VCS_REF0 B
75ARG VERSION0 B
76LABEL org.label-schema.build-date=2025-07-15T18:15:18Z org.label-schema.name=xcp_d org.label-schema.description=xcp_d- postprocessing0 B

Command

 ARG RELEASE