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pennlinc/aslprep:latest

Machine learning & AI
Data science
Manifest digest

sha256:b8f9ab8158f444368b90f9757e242bd9c8bf20edd49b56e0af5159681736cdf3

OS/ARCH

linux/amd64

Compressed size

4.77 GB

Last pushed

5 months by tsalo

Type

Image

Manifest digest

sha256:b8f9ab8158f444368b90f9757e242bd9c8bf20edd49b56e0af5159681736cdf3

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=22.040 B
5ADD file ... in / 28.17 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive LANG=en_US.UTF-8 LC_ALL=en_US.UTF-80 B
8COPY /opt/freesurfer /opt/freesurfer # buildkit939.59 MB
9COPY /usr/local/freesurfer/python/scripts/mri_synthseg /opt/freesurfer/bin/mri_synthseg # buildkit26.83 KB
10COPY /usr/local/freesurfer/python/scripts/mri_synthstrip /opt/freesurfer/bin/mri_synthstrip # buildkit3.27 KB
11COPY /usr/local/freesurfer/models /opt/freesurfer/models # buildkit1.71 GB
12COPY /usr/local/bin/msm /usr/local/bin/msm # buildkit8.97 MB
13COPY /opt/afni-latest /opt/afni-latest # buildkit14.41 MB
14RUN /bin/sh -c chmod +x29.71 KB
15RUN /bin/sh -c apt-get update113.86 MB
16RUN /bin/sh -c GNUPGHOME=/tmp gpg2.36 KB
17RUN /bin/sh -c apt-get update17.1 MB
18RUN /bin/sh -c mkdir -p15.42 MB
19RUN /bin/sh -c mkdir -p16.81 MB
20ENV OS=Linux FS_OVERRIDE=0 FIX_VERTEX_AREA= FSF_OUTPUT_FORMAT=nii.gz0 B
21ENV SUBJECTS_DIR=/opt/freesurfer/subjects FUNCTIONALS_DIR=/opt/freesurfer/sessions MNI_DIR=/opt/freesurfer/mni LOCAL_DIR=/opt/freesurfer/local0 B
22ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PATH=/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
23ENV PATH=/opt/afni-latest:/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin AFNI_IMSAVE_WARNINGS=NO AFNI_PLUGINPATH=/opt/afni-latest0 B
24ENV LANG=C.UTF-8 LC_ALL=C.UTF-8 PYTHONNOUSERSITE=1 FSLOUTPUTTYPE=NIFTI_GZ0 B
25RUN /bin/sh -c ldconfig #5.59 KB
26WORKDIR /tmp32 B
27LABEL org.label-schema.name=aslprep-base org.label-schema.description=ASLPrep base image0 B
28RUN /bin/sh -c useradd -m1.79 KB
29WORKDIR /home/aslprep32 B
30ENV HOME=/home/aslprep0 B
31COPY /templateflow /home/aslprep/.cache/templateflow # buildkit89.21 MB
32RUN /bin/sh -c chmod -R106.02 MB
33ENV MKL_NUM_THREADS=1 OMP_NUM_THREADS=10 B
34WORKDIR /tmp32 B
35COPY /app/.pixi/envs/aslprep /app/.pixi/envs/aslprep # buildkit1.74 GB
36COPY /shell-hook.sh /shell-hook.sh # buildkit617 B
37RUN /bin/sh -c cat /shell-hook.sh675 B
38ENV PATH=/app/.pixi/envs/aslprep/bin:/opt/afni-latest:/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
39ENV FSLDIR=/app/.pixi/envs/aslprep0 B
40ENV IS_DOCKER_8395080871=10 B
41ENTRYPOINT ["/app/.pixi/envs/aslprep/bin/aslprep"]0 B
42ARG BUILD_DATE=2026-04-16T20:28:26Z0 B
43ARG VCS_REF=2140be40 B
44ARG VERSION=26.0.30 B
45LABEL org.label-schema.build-date=2026-04-16T20:28:26Z org.label-schema.name=aslprep org.label-schema.description=ASLPrep: A0 B

Command

 ARG RELEASE