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ontresearch/bakta:latest

Multi-platform
Index digest

sha256:7c6ea1054bc940a58b8bb98acbc7abc5e9b28a0f5cbf1c06ecd701f4d0252088

OS/ARCH

Compressed size

2.04 GB

Last pushed

7 months by epi2melabs

Type

Image

Manifest digest

sha256:d4371c31d12268c099a29b5eb87cbdcf68036f7422d4c72d877424d0028c20b7

Image Layers

Image Layers

1ARG RELEASE0 B
2ARG LAUNCHPAD_BUILD_ARCH0 B
3LABEL org.opencontainers.image.ref.name=ubuntu0 B
4LABEL org.opencontainers.image.version=24.040 B
5ADD file ... in / 28.35 MB
6CMD ["/bin/bash"]0 B
7ENV DEBIAN_FRONTEND=noninteractive0 B
8LABEL maintainer=Oxford Nanopore Technologies0 B
9ARG WF_USER=epi2meuser0 B
10ARG WF_UID=10000 B
11ARG WF_GID=1000 B
12ARG ARCH=linux-640 B
13ARG MICROMAMBA_VERSION=1.5.120 B
14SHELL [/bin/bash -o pipefail -c]0 B
15RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1002.4 MB
16ENV SHELL=/bin/bash WF_USER=epi2meuser WF_UID=1000 WF_GID=1000 B
17ENV CW_ROOT=/opt/custflow0 B
18ENV HOME=/opt/custflow/epi2meuser0 B
19ENV CONDA_DIR=/opt/custflow/epi2meuser/conda0 B
20ENV PATH=/opt/custflow/epi2meuser/conda/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
21COPY fix-permissions /usr/local/bin/fix-permissions # buildkit670 B
22RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100663 B
23COPY entrypoint.sh /usr/local/bin/entrypoint.sh # buildkit358 B
24RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=100358 B
25ENTRYPOINT ["/usr/local/bin/entrypoint.sh"]0 B
26RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1001.3 KB
27RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.24 KB
28USER 10000 B
29WORKDIR /opt/custflow/epi2meuser32 B
30RUN |5 WF_USER=epi2meuser WF_UID=1000 WF_GID=1005.91 MB
31ENV MAMBA_EXE=/opt/custflow/epi2meuser/bin/micromamba0 B
32ENV MAMBA_ROOT_PREFIX=/opt/custflow/epi2meuser/conda0 B
33USER 10000 B
34WORKDIR /opt/custflow/epi2meuser32 B
35ARG ENVFILE=environment.yaml0 B
36ARG ROOT_INIT_SCRIPT=root_init_script.sh0 B
37ARG BEFORE_SCRIPT=before_script.sh0 B
38ARG POST_INSTALL_SCRIPT=post_install_script.sh0 B
39ARG AFTER_SCRIPT=after_script.sh0 B
40ARG BIN_DIR=bin0 B
41ENV DATABASES=/bakta_databases0 B
42ENV BAKTA_DB=/bakta_databases/db-light0 B
43ENV AMRFINDERPLUS_DB=/bakta_databases/db-light/amrfinderplus-db0 B
44USER 00 B
45COPY root_init_script.sh /opt/custflow/epi2meuser/ # buildkit245 B
46COPY bin/* /usr/local/bin/ # buildkit752 B
47COPY whalefish_info /usr/share/whalefish/info # buildkit251 B
48RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh32 B
49USER 00 B
50COPY before_script.sh /opt/custflow/epi2meuser/ # buildkit243 B
51COPY post_install_script.sh /opt/custflow/epi2meuser/ # buildkit248 B
52COPY after_script.sh /opt/custflow/epi2meuser/ # buildkit332 B
53COPY environment.yaml /opt/custflow/epi2meuser/environment.yaml # buildkit354 B
54RUN |6 ENVFILE=environment.yaml ROOT_INIT_SCRIPT=root_init_script.sh BEFORE_SCRIPT=before_script.sh2.01 GB
55USER 00 B
56WORKDIR /opt/custflow/epi2meuser32 B

Command

 ARG RELEASE