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oesteban/crn_nipype:freesurfer

Manifest digest

sha256:1d677bb99e50a635d297db17adb7ea3b30936926019a49b76ac40a5d31cbcc49

OS/ARCH

linux/amd64

Compressed size

3.5 GB

Last pushed

almost 10 years by oesteban

Type

Image

Manifest digest

sha256:1d677bb99e50a635d297db17adb7ea3b30936926019a49b76ac40a5d31cbcc49

Image Layers

Image Layers

1ADD file ... in /48.99 MB
2CMD ["/bin/bash"]0 B
3/bin/sh -c echo 'deb http://neuro.debian.net/debian213 B
4/bin/sh -c echo 'deb http://neuro.debian.net/debian221 B
5/bin/sh -c echo '#deb-src http://neuro.debian.net/debian-devel239 B
6/bin/sh -c apt-key adv --recv-keys3.09 KB
7MAINTAINER Stanford Center for0 B
8/bin/sh -c ln -snf /bin/bash124 B
9ENV SHELL=/bin/bash0 B
10ARG DEBIAN_FRONTEND=noninteractive0 B
11|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c sed549.42 MB
12ENV FSLDIR=/usr/share/fsl/5.0 FSLOUTPUTTYPE=NIFTI_GZ FSLMULTIFILEQUIT=TRUE0 B
13|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c mkdir417.43 MB
14ENV ANTSPATH=/opt/ants0 B
15ENV PATH=/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
16|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c curl23.42 MB
17|1 DEBIAN_FRONTEND=noninteractive /bin/sh -c mkdir29.99 MB
18ENV C3DPATH=/opt/c3d0 B
19ENV PATH=/opt/c3d:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
20CMD ["/bin/bash"]0 B
21MAINTAINER Stanford Center for0 B
22/bin/sh -c curl -sSL ftp://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/5.3.0-HCP/freesurfer-Linux-centos4_x86_64-stable-pub-v5.3.0-HCP.tar.gz1.84 GB
23ENV OS=Linux FS_OVERRIDE=0 FIX_VERTEX_AREA=0 B
24ENV PATH=/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/opt/c3d:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
25CMD ["/bin/bash"]0 B
26MAINTAINER Stanford Center for0 B
27WORKDIR /root0 B
28/bin/sh -c curl -sSLO https://repo.continuum.io/miniconda/Miniconda2-latest-Linux-x86_64.sh31.48 MB
29ENV PATH=/usr/local/miniconda/bin:/opt/freesurfer/bin:/opt/freesurfer/fsfast/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/opt/c3d:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/ants:/usr/lib/fsl/5.0:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
30ENV LANG=C.UTF-80 B
31ENV LC_ALL=C.UTF-80 B
32/bin/sh -c conda config --add595.77 MB
33/bin/sh -c pip install --upgrade3.3 MB
34CMD ["/bin/bash"]0 B

Command

ADD file:0e0565652aa852f62033d99f84892216020d30f64521ded5e72d4940bc4c9697 in /