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ebelter/mgi:rna-seq2

Manifest digest

sha256:ef95a333104f0b82319def5b827cf8e11cc4c7872098ded13f3ae9f0656e59a9

OS/ARCH

linux/amd64

Compressed size

580.68 MB

Last pushed

about 4 years by ebelter

Type

Image

Manifest digest

sha256:ef95a333104f0b82319def5b827cf8e11cc4c7872098ded13f3ae9f0656e59a9

Image Layers

Image Layers

1ADD file ... in / 25.45 MB
2/bin/sh -c [ -z "$(apt-get34.53 KB
3/bin/sh -c set -xe &&854 B
4/bin/sh -c mkdir -p /run/systemd163 B
5CMD ["/bin/bash"]0 B
6LABEL MAINTAINER=Eddie Belter0 B
7ENV DEBIAN_FRONTEND=noninteractive0 B
8/bin/sh -c apt update &&380.77 MB
9/bin/sh -c pip3 install pandas==0.24.252.39 MB
10/bin/sh -c pip3 install pysam==0.15.319.8 MB
11WORKDIR /apps133 B
12/bin/sh -c wget http://zlib.net/zlib-1.2.12.tar.gz &&2.88 MB
13/bin/sh -c cd zlib-1.2.12 &&689.6 KB
14/bin/sh -c wget https://tukaani.org/xz/xz-5.2.3.tar.gz &&2.85 MB
15/bin/sh -c cd xz-5.2.3 &&3.02 MB
16ARG STAR_VERSION=2.7.9a0 B
17|1 STAR_VERSION=2.7.9a /bin/sh -c wget20.48 MB
18|1 STAR_VERSION=2.7.9a /bin/sh -c cd4.23 MB
19|1 STAR_VERSION=2.7.9a /bin/sh -c git1.9 MB
20|1 STAR_VERSION=2.7.9a /bin/sh -c git8.71 MB
21|1 STAR_VERSION=2.7.9a /bin/sh -c pip327.44 MB
22WORKDIR /apps/scripts/153 B
23COPY dir:d243567f0d2a693e4858ead359564e821b754e36efa6c975d994e2ec4f30f59d in ./ 4.93 KB
24|1 STAR_VERSION=2.7.9a /bin/sh -c chmod4.92 KB
25ENV PATH=/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps/kentutils_v385_bin_bulkrna:/apps/scripts:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B
26LABEL MAINTAINER=Eddie Belter0 B
27WORKDIR /apps0 B
28/bin/sh -c wget https://github.com/deweylab/RSEM/archive/v1.2.31.zip9.75 MB
29/bin/sh -c unzip v1.2.31.zip &&8.7 MB
30/bin/sh -c cd RSEM-1.2.31 &&11.58 MB
31ENV PATH=/apps/RSEM-1.2.31:/apps/STAR-2.7.9a/bin/Linux_x86_64:/apps/kentutils_v385_bin_bulkrna:/apps/scripts:/apps:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin0 B

Command

ADD file:53f100793e6c0adfca99977a42bb65cb7971c26e4d6e4499d1c30a1f51f06854 in /